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  • ร—
    Home ยป Recipes ยป Cupcake Recipes

    Spiced Apple Cupcakes

    Updated: Oct 7, 2025 by Megan Weimer ยท This post may contain affiliate links.

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    These spiced apple cupcakes taste like Fall in a bite! They're moist and flavored with warm spices like cinnamon, nutmeg, and ginger. Studded with fresh chopped apples and topped with cream cheese frosting, these cupcakes make the perfect, cozy Fall dessert.

    Cupcakes on a wood cake stand garnished with apple chips.

    Fall is here, and baking spiced apple cupcakes with cream cheese frosting is the perfect way to ring in the season. They're soft like a classic vanilla cake but slightly dense and moist, almost like banana bread. They're gently spiced with cinnamon, ginger, nutmeg, and allspice too!

    Like these cinnamon apple blondies, tender pieces of freshly chopped apples are folded into the cupcake batter. They're juicy little surprises that melt in your mouth! They're perfect for Fall picnics or Thanksgiving dinner.

    If you love apple desserts, check out this honey apple crisp, apple cider muffins, apple carrot cake, caramel apple crumb cake, and apple pie cheesecake!

    Jump to:
    • Why You'll Love This Recipe
    • Key Ingredients
    • Variation Ideas
    • Step by Step Instructions
    • Expert Baking Tips
    • Storage Instructions
    • Frequently Asked Questions
    • More Fall Recipes to Try
    • ๐Ÿ“– Recipe
    • ๐Ÿ’ฌ Comments

    Why You'll Love This Recipe

    • Soft and tender texture- These apple spice cupcakes are made using the reverse creaming method, which is when butter is creamed into the dry ingredients. The fat coats the flour, making it more difficult for gluten to develop for a tender texture. I use this technique for lots of cupcakes, including these almond cupcakes and apple cider cupcakes!
    • Cream cheese frosting- Each cupcake has a swirl of tangy cream cheese frosting on top. You can make a traditional cream cheese frosting, cinnamon cream cheese frosting, or try a softer cream cheese frosting without butter.
    • Easy to make- You can whip up a batch in less than an hour with basic baking tools!

    Key Ingredients

    Ingredients to make spiced apple cupcakes on a wooden surface.
    • All purpose flour- Measure it correctly, ideally in grams with a kitchen scale. If you don't have a scale, gently spoon it into your measuring cup, then level it off. Don't pack it in or you'll have way too much, which makes cupcakes dry.
    • Baking powder- Check the expiration date before you use it. The cupcakes won't rise properly if it's expired.
    • Spices- Ground cinnamon, ginger, nutmeg, and allspice are used to give the cupcakes a warm and cozy taste.
    • Brown sugar- This sweetens the cupcakes plus adds moisture and a deep flavor. You can use light or dark brown sugar.
    • Butter and oil- Making cupcakes with both butter and oil makes them soft yet moist. Use unsalted butter and flavorless oil like canola or vegetable oil.
    • Eggs- 1 egg holds the ingredients together, and adding an extra egg white makes the cupcakes extra fluffy.
    • Buttermilk- The acid in buttermilk tenderizes the gluten, creating an extra soft crumb. The best substitutes for buttermilk are plain kefir, Greek yogurt, or sour cream.
    • Chopped apples- My favorite apples for apple pie filling, apple crisp, and cakes are Honeycrisp, Pink Lady, and Granny Smith apples. You need crisp apples that don't mushy while baking. I used 1 Honeycrisp and 1 Granny Smith for the perfect mix of sweet and tart. They can be peeled or unpeeled.

    For quantities, see the recipe card at the bottom of this blog post.

    Variation Ideas

    • Add chopped nuts- Fold pecans or walnuts into the batter with the apples for extra crunch.
    • Salted caramel drizzle- Spoon salted caramel sauce over the frosting for a caramel apple vibe.
    • Streusel topping- Top the cupcakes with a sprinkle of cinnamon streusel. You can use the recipe from these mini cinnamon muffins. Adding oats would be delicious too!

    Step by Step Instructions

    Preheat the oven to 350ยฐF and line a cupcake pan with 12 paper liners. Avoid silicone or dark colored tins!

    Dry ingredients in a mixing bowl.

    Step 1: Whisk the flour, baking powder, spices, granulated sugar, brown sugar, and salt in the bowl of a stand mixer with the paddle attachment.

    Dry ingredients and butter mixed together in a mixing bowl.

    Step 2: Beat in the softened butter and low speed until the butter coats the flour mixture and looks like wet sand.

    Batter in a large bowl.

    Step 3: Mix in the oil, egg, egg white, and vanilla extract on low until a thick batter forms.

    Cupcake batter in a large mixing bowl.

    Step 4: Drizzle in the buttermilk with the mixer on low. The batter will be quite thin.

    Cupcake batter with apples in a large glass bowl.

    Step 5: Fold in the diced apples until they're evenly distributed throughout.

    Cupcake batter in a lined cupcake pan.

    Step 6: Use a cookie scoop to evenly portion the cupcake batter between the 12 liners, filling each ยฝ full. Bake until a toothpick inserted in the center comes out clean.

    A spiced apple cupcake on a wood surface with no frosting.

    Step 7: Let the cupcakes cool in the pan for 10 minutes, then transfer to a wire rack to cool completely. Don't leave them in the pan too long or condensation will form in the wrappers and make the cupcakes soggy.

    Cream cheese frosting in a large bowl with a hand mixer.

    Step 8: Make the cream cheese frosting by beating softened butter and cream cheese in a large bowl until smooth. Gradually mix in the powdered sugar 1 cup at a time on low to avoid a sugar cloud.

    Apple spice cupcakes on a cake stand.

    Step 9: Fill a piping bag fitted with a large piping tip with frosting and pipe a swirl on top of each apple cupcake. Garnish with apple chips!

    Expert Baking Tips

    1. Use room temperature ingredients. Room temperature butter, eggs, and buttermilk mix in more easily than cold ones, creating a uniform batter. Pull them all out of the fridge 1-2 hours before you start baking.
    2. Don't overmix the batter. With the reverse creaming method, overmixing is harder to do! Just be careful to fold in the apples until they're just combined. Overmixing makes tough and gummy cupcakes.
    3. Don't overbake. Check on the cupcakes a couple minutes before the suggested baking time since oven temperatures can vary. They're done when a toothpick inserted in the center comes out clean.

    Storage Instructions

    Store unfrosted apple spice cupcakes at room temperature in an airtight container for up to 2 days. After that, store in the refrigerator for an additional 3 days.

    If the cupcakes are frosted, store them in the refrigerator for up to 5 days. Let them thaw on the counter before eating.

    Cupcakes garnished with apple chips on a wood cake stand.

    Frequently Asked Questions

    Can I freeze the cupcakes?

    Yes!ย Freeze them on a baking sheet for 2 hours or until frozen solid. Freeze them in a freezer bag for up to 3 months. Let them thaw in the refrigerator overnight before eating.

    Why are my cupcakes dense?

    The most likely reason is that you over-measured the flour! This is why I always recommend measuring flour in grams with a digital food scale. It's so much more accurate!

    Can I use a different frosting?

    Yes! You can use a classic vanilla American buttercream, cinnamon buttercream, Swiss meringue buttercream, or whatever your heart desires.

    More Fall Recipes to Try

    • Hot chocolate cupcakes garnished with mini marshmallows on a cake stand.
      Hot Cocoa Cupcakes
    • A chocolate pumpkin cheesecake on parchment paper.
      Chocolate Pumpkin Cheesecake
    • Pumpkin coffee cake cut open on a cake stand.
      Pumpkin Coffee Cake
    • An earl grey pie covered with homemade whipped cream.
      Earl Grey Pie

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    ๐Ÿ“– Recipe

    Spiced apple cupcakes on a wooden cake stand.

    Spiced Apple Cupcakes

    Megan Weimer
    These spiced apple cupcakes with cream cheese frosting are the perfect cozy Fall dessert. They're moist and flavored with warm spices, and each cupcake is studded fresh chopped apples.
    5 from 3 votes
    Print Recipe Pin Recipe
    Prep Time 20 minutes mins
    Cook Time 20 minutes mins
    Total Time 40 minutes mins
    Course Dessert
    Cuisine American
    Servings 14 cupcakes
    Calories 461.1 kcal

    Equipment

    • 1 5-quart stand mixer
    • 1 cupcake pan

    Need Metric or US Customary Measurements?

    Use the buttons below to toggle between grams and cups!

    Ingredients
     
     

    Spiced Apple Cupcakes

    • 1 ยฝ cups all purpose flour
    • 2 tsp baking powder
    • 1 teaspoon ground cinnamon
    • ยฝ teaspoon ground ginger
    • ยฝ teaspoon nutmeg
    • ยผ teaspoon allspice
    • ยฝ cup granulated sugar
    • ยฝ cup brown sugar light or dark
    • ยผ teaspoon salt
    • โ…“ cup unsalted butter softened
    • โ…“ cup neutral oil
    • 1 large egg room temperature
    • 1 egg white room temperature
    • 2 teaspoon vanilla extract
    • โ…” cup buttermilk room temperature
    • 1 cup chopped apples Honeycrisp or Granny Smith

    Cream Cheese Frosting

    • ยฝ cup unsalted butter softened
    • 8 ounces cream cheese room temperature
    • 4 cups powdered sugar
    • 1 teaspoon vanilla extract
    • ยผ teaspoon salt

    Instructions
     

    Apple Cupcakes

    • Preheat the oven to 350ยฐF (180ยฐC). Fill a cupcake pan with 12 liners and set aside.
    • Add flour, baking powder, spices, white and brown sugars, and salt to the bowl of a stand mixer fitted with the paddle attachment. Spin 5 times until well mixed.
      1 ยฝ cups all purpose flour, 2 teaspoon baking powder, 1 teaspoon ground cinnamon, ยฝ teaspoon nutmeg, ยผ teaspoon allspice, ยฝ cup granulated sugar, ยฝ cup brown sugar, ยผ teaspoon salt, ยฝ teaspoon ground ginger
    • Add the softened butter and beat on low for 3-4 minutes until the texture is like wet sand.
      โ…“ cup unsalted butter
    • Add the oil, egg, egg white, and vanilla extract. Mix on low until a batter forms.
      โ…“ cup neutral oil, 1 large egg, 1 egg white, 2 teaspoon vanilla extract
    • Pour in the buttermilk and stir on low until well combined. The batter will be thin.
      โ…” cup buttermilk
    • Gently fold in the apples using a rubber spatula.
      1 cup chopped apples
    • Evenly portion the batter between the cupcake liners, filling each โ…” full. Bake for 18-22 minutes or until a toothpick inserted in the center comes out clean.
    • Remove from the oven and let the cupcakes cool in the pan for 5 minutes before transferring to a wire rack. Let cool completely before frosting.

    Cream Cheese Frosting

    • Beat room temperature butter and cream cheese together in a stand mixer with the paddle attachment on medium-low speed until creamy and lump free.
      ยฝ cup unsalted butter, 8 ounces cream cheese
    • With the mixer on low, add the powdered sugar 1 cup at a time until combined and smooth. Scrape down the sides of the bowl as needed.
      4 cups powdered sugar
    • Add the vanilla and salt and mix well on medium-low speed.
      1 teaspoon vanilla extract, ยผ teaspoon salt
    • Fill a piping bag with frosting and pipe a swirl on top of each cupcake. Enjoy!

    Video

    Notes

    Nutritional information is an estimate. Accuracy is not guaranteed.
    Measure the flour in grams with a kitchen scale for the best results.
    Storage: Store unfrosted cupcakes at room temperature in an airtight container for up to 2 days.ย If they're frosted, store in the refrigerator for up to 5 days. Let thaw on the counter for an hour before eating.
    Store leftover cream cheese frosting in an airtight container in the refrigerator for 3 days. Give it a good mix before using.
    Freezing:ย Freeze cupcakes on a baking sheet for 2 hours or until frozen solid. Place in a freezer bag and freeze for up to 3 months.ย When ready to enjoy, let them thaw at room temperature for 2 hours or in the refrigerator overnight.

    Nutrition

    Serving: 1cupcakeCalories: 461.1kcalCarbohydrates: 62.4gProtein: 3.5gFat: 22.7gSaturated Fat: 11gPolyunsaturated Fat: 2.3gMonounsaturated Fat: 7.9gTrans Fat: 0.5gCholesterol: 58.4mgSodium: 219.4mgPotassium: 85.7mgFiber: 0.7gSugar: 50.6gVitamin A: 596.6IUVitamin C: 0.4mgCalcium: 79mgIron: 0.9mg
    Tried this recipe?Let us know how it was!

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    About Megan Weimer

    Megan Weimer is the recipe developer, writer, and food photographer behind Dollop of Dough. Since 2020, she's been inspiring home bakers to create delicious dessert recipes for any occasion that are easy, reliable, and tested in her own kitchen.

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    Hi there, I'm Megan!

    Welcome to Dollop of Dough! I'm a self-taught baker and professional recipe developer based in Chicago. I created this blog to share simple baked goods and dessert recipes that are easy to prepare for everyday occasions. With each recipe, I hope to spark joy and inspire my community of dessert enthusiasts.

    Read more about Megan here!

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