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    Home ยป Recipes ยป Fall and Winter

    Apple Pie Stuffed Cheesecake

    Updated: Nov 25, 2025 by Megan Weimer ยท This post may contain affiliate links.

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    Jump to Recipe

    This apple pie stuffed cheesecake is what dreams are made of! Creamy baked cheesecake filled with apple pie filling sits on top of a classic graham cracker crust. Pour salted caramel sauce on top to make the ultimate Fall dessert for any occasion.

    A slice of apple pie stuffed cheesecake on a white plate.

    I love apple pie. I also love cheesecake. What could be better than fusing the two together to make a decadent apple pie stuffed cheesecake!

    First, we make a homemade apple pie filling with butter, brown sugar, and all the warm spices like cinnamon, ginger, cloves, and cardamom. We layer that between rich and creamy cheesecake batter on a graham cracker crust and bake!

    This is a great recipe to make if you have lots of apples from apple picking laying around. It's a dessert your guests will ask for year after year.

    For more festive cheesecake recipes, try brown butter pumpkin cheesecake, salted caramel cheesecake, raspberry brownie cheesecake, or pumpkin chocolate cheesecake.

    If you love apple recipes, check out these apple spice cupcakes, apple cider donut bread, honey apple crisp, salted caramel apple crumble cake, and apple cider cupcakes!

    Jump to:
    • Ingredient Notes
    • Substitutions and Variations
    • Step by Step Instructions
    • Expert Baking Tips
    • How to Store
    • Freezing Instructions
    • Frequently Asked Questions
    • More Fall Recipes to Try
    • ๐Ÿ“– Recipe
    • ๐Ÿ’ฌ Comments

    Ingredient Notes

    Ingredients to make apple pie filling.
    Ingredients to make cheesecake crust.
    Ingredients to make cheesecake filling.
    • Apples- My favorite apples for making pie filling are Honeycrisp and Granny Smith. All of these have a bright tartness that shines through when cooked in sugar. They also don't get soggy when cooked down. I used Pink Lady apples when testing this recipe and it turned out great!
    • Sugars- We're using brown sugar in the apple filling and graham cracker crust for moisture and a subtle molasses flavor. It can be light or dark brown sugar, just make sure it's moist and fresh! Regular granulated sugar is in the apples and cheesecake filling.
    • Butter- Unsalted butter is key for giving the apples and crust a rich, buttery flavor. If you only have salted butter, that's ok! Just leave out the additional salt in the apples and crust.
    • Spices- Apple pie filling is flavored with a homemade apple pie spice blend. It includes ground cinnamon, ginger, nutmeg, cloves, allspice, and cardamom.
    • Cornstarch- Some cornstarch helps thicken the apple filling and helps the cheesecake filling set up in the oven. It also prevents cracks!
    • Graham cracker crumbs- Use any brand of graham crackers you like. You can buyย graham cracker crumbs, pulse whole crackers in a blender or food processor, or crush them by hand in a plastic bag with a rolling pin.
    • Cream cheese- Make sure to use softened full fat cream cheese for the best thick and creamy texture. It should come in a block. Don't use cream cheese spread in a tub because it's too runny.
    • Sour cream- This helps to slightly offset the dense, rich texture of the cream cheese and adds moisture and a tangy flavor. Plain Greek yogurt is the best substitute.
    • Eggs- 3 large eggs bind the cheesecake filling ingredients and add rich flavor. Make sure the eggs, cream cheese, and sour cream are all room temperature so they mix easily. Take out of the refrigerator 1-2 hours before you start baking.

    Substitutions and Variations

    • Different crust- You can use a different kind of biscuit or cookie to make the crust instead of graham cracker. Gingersnaps or Biscoff cookies would be delicious.
    • Add nuts- Sprinkle chopped pecans or walnuts in the batter or on top for more nutty flavor and some crunch.
    • Topping ideas- Top the cheesecake with a crumble (like this blueberry crumble cheesecake), whipped cream, or meringue to make it look and taste even more impressive!

    Step by Step Instructions

    Apples and sugar in a pot.

    Step 1: First, cut the apples (peeled or unpeeled) into ยฝ inch thick slices. Add the butter to a large pot over medium heat and add your apples, granulated sugar, brown sugar, and spices. Cook for 10 minutes or until the apples are tender stirring occasionally.

    Cornstarch and water in a bowl.

    Step 2: When the apples are nearly done, create a slurry in a small bowl by whisking cornstarch and water together with a fork. This will help thicken the filling.

    Apple pie filling in a pot.

    Step 3: Add the slurry to the filling and turn the heat down to low. Stir until the apples are coated in a syrupy sauce. Take off the heat and let cool completely before making the cheesecake filling.

    A bowl of graham cracker crumbs.

    Step 4: To make the graham cracker crust, first preheat the oven to 350ยฐF and Stir graham cracker crumbs, brown sugar, and salt together in a large bowl and then pour in cooled melted butter. Stir to coat the crumbs.

    Graham cracker crust in a springform pan.

    Step 5: Firmly press the graham cracker mixture into a lined 9-inch springform pan. Press the crust up the sides of the pan so the filling doesn't stick. Bake for 10 minutes.

    Remove from the oven, lower the heat to 325ยฐF, and fill a cast iron skillet or casserole dish with an inch of hot water and place it on the bottom rack. This is our "water bath". The stream from the water creates a humid environment that prevents the cheesecake from drying out and cracking.

    Beating cream cheese in a bowl with a handheld mixer.

    Step 6: In a large bowl using a hand or stand mixer with the paddle attachment, beat softened cream cheese and sugar together on low until smooth. Scrape down the sides of the bowl with a rubber spatula to get any clumps.

    Mixing cream cheese in a bowl.

    Step 7: Next, beat in the vanilla, cornstarch, and salt on low until smooth and creamy. Mix in the sour cream.

    Cheesecake filling being mixed in a bowl.

    Step 8: Next, mix in the eggs one at a time. Scrape the sides of the bowl after the second and third egg. Switch to a rubber spatula and mix the batter by hand to eliminate air bubbles.

    Apple filling on top of cheesecake batter in a pan.

    Step 9: Pour half of the cheesecake batter on top of the pre-baked crust and smooth it out. Add an even layer of apple filling.

    Unbaked cheesecake in a springform pan.

    Step 10: Pour the rest of the cheesecake batter on top of the apples. Bake for 55-65 minutes or until the cheesecake is puffed up and jiggles like Jell-O.

    Baked cheesecake on parchment paper.

    Step 11: Turn off the oven and crack the door open. Let the cheesecake cool in the warm oven for 1 hour. Then take it out and let cool on top of the oven for another hour. Cover with plastic wrap and chill in the refrigerator for 6 hours or overnight.

    A cheesecake covered in salted caramel.

    Step 12: Once the cheesecake is set, release the sides of the pan, top with extra apple filling or caramel sauce, slice, and enjoy!

    Expert Baking Tips

    1. Use room temperature cream cheese. Softened cream cheese is easier to mix into a smooth, uniform consistency. We don't want big chunks of cream cheese in the batter!
    2. Make sure the apple filling is completely cool. If the apples aren't cool before assembling the cheesecake, the filling will melt.
    3. Use a water bath. A water bath is important because the steam and moisture from it keeps the cheesecake from getting rubbery, dry, and cracking.
    4. Cool gradually. Don't open the oven door while the cheesecake is baking! The sudden cold air can shock the cheesecake and make it crack. Cool it gradually to prevent cracks, moving from inside the oven, to on top of it, to the refrigerator. As cheesecake cools, it shrinks. If it shrinks too quickly, it can crack.

    How to Store

    Store the apple pie stuffed cheesecake in a large airtight container (like a cake carrier) in the refrigerator for up to 5 days.

    Freezing Instructions

    Freeze individual pieces of cheesecake rather than the whole thing. Cheesecake slices are much easier to thaw! Slice it up, place the pieces in an airtight container or freezer bag, and freeze for up to 3 months.

    Thaw the slices in the refrigerator for 1-2 hours before eating.

    Pouring caramel sauce on top a cheesecake.

    Frequently Asked Questions

    Can I use canned apple filling?

    You sure can for a shortcut! You'll need one 21 ounce can.

    Do I need to use a water bath?

    Yes, you do! Definitely don't skip it. The water bath prevents cracks, but it also helps create a smoother, creamier, richer cheesecake texture. It keeps the cheesecake from browning on top too.

    How do I know when the cheesecake is done?

    Give the pan a little shake. If the cheesecake has a stiff jiggle (like Jell-O), it's ready. If it sloshes or wobbles, it needs to bake a little longer.

    More Fall Recipes to Try

    • Hot chocolate cupcakes garnished with mini marshmallows on a cake stand.
      Hot Cocoa Cupcakes
    • A chocolate pumpkin cheesecake on parchment paper.
      Chocolate Pumpkin Cheesecake
    • Pumpkin coffee cake cut open on a cake stand.
      Pumpkin Coffee Cake
    • An earl grey pie covered with homemade whipped cream.
      Earl Grey Pie

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    ๐Ÿ“– Recipe

    A slice of apple pie stuffed cheesecake on a white plate.

    Apple Pie Stuffed Cheesecake

    Megan Weimer
    This apple pie stuffed cheesecake is what dreams are made of! Creamy baked cheesecake filled with apple pie filling sits on top of a classic graham cracker crust. Pour salted caramel sauceย on top to make the ultimate Fall dessert for any occasion.
    5 from 2 votes
    Print Recipe Pin Recipe
    Prep Time 20 minutes mins
    Cook Time 1 hour hr 40 minutes mins
    Chill Time 8 hours hrs
    Total Time 10 hours hrs
    Course Dessert
    Cuisine American
    Servings 12 slices
    Calories 575 kcal

    Equipment

    • 1 9-inch springform pan
    • 1 Electric hand mixer or stand mixer with the paddle attachment

    Need Metric or US Customary Measurements?

    Use the buttons below to toggle between grams and cups!

    Ingredients
     
     

    Apple Pie Filling

    • 3 lbs apples
    • ยผ cup unsalted butter
    • ยผ cup granulated sugar
    • ยผ cup brown sugar light or dark
    • 1 teaspoon ground cinnamon
    • ยฝ teaspoon ground ginger
    • ยผ teaspoon nutmeg
    • ยผ teaspoon ground cloves
    • โ…› teaspoon allspice
    • โ…› teaspoon cardamom
    • 2 tablespoon cornstarch
    • ยผ cup water

    Graham Cracker Crust

    • 2 cups graham cracker crumbs 2 sheets
    • โ…“ cup brown sugar
    • ยฝ teaspoon salt
    • ยฝ cup unsalted butter melted

    Cheesecake Filling

    • 24 oz cream cheese full fat, room temperature
    • ยพ cup granulated sugar
    • 2 teaspoon vanilla extract
    • 1 tablespoon cornstarch
    • ยฝ teaspoon salt
    • โ…” cup sour cream room temperature
    • 3 large eggs room temperature

    Instructions
     

    Apple Pie Filling

    • First, cut the apples into ยฝ inch thick slices. Add the butter to a large pot over medium heat. Add sliced apples, granulated sugar, brown sugar, and spices. Cook for 10 minutes or until the apples are tender stirring occasionally.ย 
      3 lbs apples, ยผ cup unsalted butter, ยผ cup granulated sugar, ยผ cup brown sugar, 1 teaspoon ground cinnamon, ยฝ teaspoon ground ginger, ยผ teaspoon nutmeg, ยผ teaspoon ground cloves, โ…› teaspoon allspice, โ…› teaspoon cardamom
    • When the apples are nearly done, whisk cornstarch and water together in a small bowl with a fork to create a slurry.
      2 tablespoon cornstarch, ยผ cup water
    • Add the slurry to the apples and turn the heat to low. Stir until the apples are coated in a syrupy sauce. Take off the heat and let cool completely.ย 

    Graham Cracker Crust

    • Preheat the oven to 350ยฐF/180ยฐC. Whisk graham cracker crumbs, brown sugar, and salt together in a large bowl and then pour in cooled melted butter. Stir to coat the crumbs.
      2 cups graham cracker crumbs, โ…“ cup brown sugar, ยฝ teaspoon salt, ยฝ cup unsalted butter
    • Firmly press the graham cracker mixture into the bottoms and up the sides of a lined springform pan. Bake for 10 minutes.
    • Remove from the oven, lower the heat to 325ยฐF/165ยฐC, and fill a cast iron skillet or casserole dish with hot water and place it on the bottom rack. This is our "water bath" which creates steam to keep the cheesecake from cracking.

    Cheesecake Filling

    • In a large bowl with a hand or stand mixer with the paddle attachment, beat softened cream cheese and sugar together on low until smooth.
      24 oz cream cheese, ยพ cup granulated sugar
    • Beat in vanilla, cornstarch, and salt on low. Scrape the sides of the bowl and mix in the sour cream.
      2 teaspoon vanilla extract, 1 tablespoon cornstarch, ยฝ teaspoon salt, โ…” cup sour cream
    • Mix in the eggs one at a time. Switch to a rubber spatula and mix by hand to pop air bubbles.
      3 large eggs
    • Pour half of the cheesecake batter on top of the pre-baked crust in an even layer. Add a layer of apple filling and top with the rest of the cheesecake batter. Smooth out the top.
    • Quickly place the cheesecake in the oven on the rack above the water bath and close the door. Bake for 55-65 minutes or until the cheesecake is puffed up. It should jiggle like Jell-O, not wobble.
    • Turn off the oven and let the cheesecake cool in it for 1 hour with the door cracked open. Take it out and let cool on top of the oven for another hour. Cover with plastic wrap and chill in the refrigerator for 6 hours or overnight.
    • Once the cheesecake is set, release the sides of the pan, and top with remaining apple filling and caramel sauce. Enjoy!

    Video

    Notes

    Use room temperature cream cheese, sour cream, and eggs to create a uniform batter.
    Don't skip the water bath. The cheesecake can get dry, rubbery, and can crack without it.
    Let the cheesecake cool gradually to prevent cracks.
    Storage: Store in a large airtight container in the refrigerator for up to 5 days.
    Freezing:ย Slice the cheesecake, place the pieces in an airtight container or freezer bag, and freeze for up to 3 months.ย Thaw in the refrigerator for 1-2 hours before eating.

    Nutrition

    Serving: 1sliceCalories: 575kcalCarbohydrates: 59.4gProtein: 6.6gFat: 36.2gSaturated Fat: 20.6gPolyunsaturated Fat: 1.7gMonounsaturated Fat: 9.5gTrans Fat: 0.5gCholesterol: 136.2mgSodium: 490.2mgPotassium: 274mgFiber: 3.3gSugar: 44.7gVitamin A: 1317IUVitamin C: 5.4mgCalcium: 107.1mgIron: 1.1mg
    Tried this recipe?Let us know how it was!

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    About Megan Weimer

    Megan Weimer is the recipe developer, writer, and food photographer behind Dollop of Dough. Since 2020, she's been inspiring home bakers to create delicious dessert recipes for any occasion that are easy, reliable, and tested in her own kitchen.

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    Hi there, I'm Megan!

    Welcome to Dollop of Dough! I'm a self-taught baker and professional recipe developer based in Chicago. I created this blog to share simple baked goods and dessert recipes that are easy to prepare for everyday occasions. With each recipe, I hope to spark joy and inspire my community of dessert enthusiasts.

    Read more about Megan here!

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